MSK SPECTRUM is a multi-modal, multidisciplinary prospective study of spatiotemporal determinants of High Grade Serous Ovarian Cancer (HGSOC) evolution, treatment and response. Accounting for ~ 80% of ovarian cancers, HGSOC is the most lethal gynecological malignancy and is a cancer of major unmet clinical need. Challenges in disease management relate to several unresolved questions about disease biology and diagnostic modalities.

Prospective longitudinal bloods and tissues from laparoscopic tissue biopsies and debulking surgeries are collected for multi-modal molecular measurements. The program brings together MSK’s formidable expertise across the disciplines of high-resolution genomics and computer science, radiology and radiomics, surgery, tissue banking and sample preparation, medical oncology, immuno-oncology and high-resolution tissue profiling to generate a comprehensive and integrative dataset that will allow us to address the following major aims: i) characterize malignant and immune diversity at diagnosis, ii) survey the co-evolution of malignant cells and the immune response, and iii) stratify patients on standard-of-care and investigational compounds based on their genomic and transcriptomic signatures.

The goal is to create a framework in utilizing integrated multi-modal data as a route to advanced diagnostics and to ultimately establish a proof-of-concept for integrated diagnostics that will benefit MSK disease management teams across the institution.

Grants

Les Lois Shaw Foundation

The spatio-temporal determinants of treatment response in newly diagnosed high grade serous ovarian cancers: a multi-modal prospective study

Ovarian Cancer Research Foundation

Profiling co-evolution of ovarian cancer and its immune microenvironment

Department of Defense

Dissecting the impact of mutational processes on therapeutic response in ovarian cancer

MSK SPECTRUM Co-Chairs

  • Sohrab Shah, PhD

    Chief, Member, Computational Oncology
    Co-Chair, MSK SPECTRUM
  • Carol Aghajanian, MD

    Chief Attending, Department of Surgery
    Gynecologic Medical Oncology Service
    Medical Oncologist, Professor of Medicine
    Co-Chair, MSK SPECTRUM
  • Nadeem Abu-Rustum, MD, FACOG, FACS

    Chief Attending, Gynecology Service, Department of Surgery
    Vice Chair for Technology Development, Department of Surgery
    Avon Chair in Gynecologic Oncology
    Co-Chair, MSK SPECTRUM

MSK SPECTRUM PIs

  • Agnès Viale, PhD

    Laboratory Member
    Associate Director, Marie-Josée & Henry R. Kravis Center for Molecular Oncology
    Head, Integrated Genomics Operation
  • Andrew McPherson, PhD

    Assistant Member Computational Oncologist
    Department of Epidemiology & Biostatistics
  • Britta Weigelt, PhD

    Associate Attending Research Scientist
    Department of Pathology
    Director, Gynecology DMT Research Laboratory
  • Claire Friedman, MD

    Assistant Attending Medical Oncologist
    Department of Medicine
  • Dennis S. Chi, MD, FACOG, FACS

    Attending, Gynecology Service, Department of Surgery
    Ronald O. Perelman Chair in Gynecologic Surgery
    Deputy Chief, Gynecology Service
    Head, Ovarian Cancer Surgery, Department of Surgery
  • Dmitriy Zamarin, MD, PhD

    Assistant Attending Medical Oncologist
    Department of Medicine
  • Elizabeth Jewell, MD

    Associate Attending, Department of Surgery
    Vice Chair, Regional Network & Affiliates
    Director of Surgery, MSK Monmouth & MSK Basking Ridge
    Director of MSK Monmouth ORs
  • Elli Papaemmanouil, PhD

    Assistant Member Computational Oncologist
    Department of Epidemiology & Biostatistics
  • Ginger J. Gardner, MD, FACOG

    Attending Surgeon, Department of Surgery
    Ovarian Cancer Surgery
    Physician Lead, Gynecology Disease Management Team Alliance
    Vice Chair of Hospital Operations, Department of Surgery
  • Ines Nikolovski, MBBS

    Assistant Attending Radiologist
    Department of Radiology
  • Kara Long Roche, MD, MSc, FACOG

    Assistant Attending, Department of Surgery
    Associate Director, Gynecologic Oncology Fellowship Program
    Surgeon, Ovarian Cancer Surgery
  • Lora Hedrick Ellenson, MD

    Attending Pathologist
    Director, Gynecologic Pathology
    Department of Pathology
  • Michael F. Berger, PhD

    Associate Attending Pathologist, Department of Pathology
    Associate Director, Marie-Josée and Henry R. Kravis Center for Molecular Oncology
  • Oliver Zivanovic, MD, PhD

    Assistant Attending Surgeon, Ovarian Cancer Surgery, Department of Surgery
    Director, Innovative Surgical Technology, Gynecology Service, Department of Surgery
  • Robert Soslow, MD

    Attending Surgical Pathologist, Department of Pathology
    Director, Gynecologic Pathology Fellowship Program
  • Samuel F. Bakhoum, MD, PhD

    Assistant Member, Human Oncology and Pathogenesis Program
    Assistant Attending Radiation Oncologist, Department of Radiation Oncology
  • Travis Hollmann, MD, PhD

    Associate Attending Pathologist, Department of Pathology
    Director, Advanced Immunomorphology Platforms
  • Vance Broach, MD

    Assistant Attending, Department of Surgery
    Co-Director: MSK Enhanced Surgical Recovery Program
    Surgeon
  • Yukio Sonoda, MD, FACOG, FACS

    Attending Surgeon, Department of Surgery
    Ovarian Cancer Surgery
  • Yulia Lakhman, MD

    Associate Attending Radiologist
    Department of Radiology

MSK SPECTRUM Staff

  • Florian Uhlitz, PhD

    Senior Computational Biologist
  • Kaity Chang

    Clinical Research Manager
  • Ana Maroldi

    Research Technician
  • Michelle Wu

    Research Project Associate
  • Neeman Mohibullah, PhD

    Manager Research and Development, Integrated Genomics Operations
    Center for Molecular Oncology Technology Innovation
  • Kevin Boehm

    MD-PhD Student
    Weill Cornell/Rockefeller/Sloan Kettering Tri-Institutional MD-PhD Program
  • Christopher Fong

    Bioinformatics Software Engineer III
  • Marc Williams, PhD

    Research Fellow
  • Hongyu Shi

    PhD Student
    Louis V. Gerstner Jr. Graduate School of Biomedical Sciences (GSK)
  • Ignacio Vazquez-Garcia, PhD

    Research Fellow
  • Jamie Lim

    Research Assistant
  • Tyler Funnell

    PhD Candidate
    Tri-Institutional PhD Program in Computational Biology & Medicine
  • Nicholas Ceglia, PhD

    Senior Computational Biologist II

MSK SPECTRUM Administration

  • Anika Begum

    Project Coordinator

Contact Anika Begum, Project Coordinator, with any inquiries.